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Submodules

• seabirdfilehandler.bottlefile module
  • BottleFile
    • BottleFile.create_dataframe()
    • BottleFile.adding_timestamp_column()
    • BottleFile.setting_dataframe_dtypes()
    • BottleFile.selecting_rows()
    • BottleFile.reading_data_header()
    • BottleFile.add_station_and_event_column()
    • BottleFile.add_position_columns()
• seabirdfilehandler.bottlelogfile module
  • BottleLogFile
    • BottleLogFile.data_whitespace_removal()
    • BottleLogFile.obtaining_reset_time()
    • BottleLogFile.create_list()
    • BottleLogFile.convert_date()
    • BottleLogFile.create_dataframe()
• seabirdfilehandler.cnvfile module
  • CnvFile
    • CnvFile.create_dataframe()
    • CnvFile.reading_start_time()
    • CnvFile.absolute_time_calculation()
    • CnvFile.add_start_time()
    • CnvFile.get_processing_step_infos()
    • CnvFile.df2cnv()
    • CnvFile.array2cnv()
    • CnvFile.to_cnv()
    • CnvFile.add_processing_metadata()
    • CnvFile.add_station_and_event_column()
    • CnvFile.add_position_columns()
    • CnvFile.add_cast_number()
• seabirdfilehandler.datafiles module
  • DataFile
    • DataFile.read_file()
    • DataFile.sensor_xml_to_flattened_dict()
    • DataFile.structure_metadata()
    • DataFile.define_output_path()
    • DataFile.to_csv()
    • DataFile.selecting_columns()
• seabirdfilehandler.file_collection module
  • get_collection()
  • FileCollection
    • FileCollection.extract_file_type()
    • FileCollection.collect_files()
    • FileCollection.load_files()
    • FileCollection.get_dataframes()
    • FileCollection.get_collection_dataframe()
    • FileCollection.tidy_collection_dataframe()
    • FileCollection.use_bad_flag_for_nan()
    • FileCollection.set_dtype_to_float()
    • FileCollection.select_real_scan_data()
    • FileCollection.to_csv()
  • CnvCollection
    • CnvCollection.get_dataframes()
    • CnvCollection.get_data_table_meta_info()
    • CnvCollection.get_array()
    • CnvCollection.get_processing_steps()
  • HexCollection
    • HexCollection.get_xmlcons()
• seabirdfilehandler.geomar_ctd_file_parser module
  • GEOMARCTDFile
    • GEOMARCTDFile.read_file()
    • GEOMARCTDFile.create_dataframe()
• seabirdfilehandler.hexfile module
  • HexFile
    • HexFile.get_corresponding_xmlcon()
• seabirdfilehandler.parameter module
  • Parameters
    • Parameters.get_parameter_names()
    • Parameters.get_parameter_list()
    • Parameters.create_full_ndarray()
    • Parameters.create_parameter_instances()
    • Parameters.differentiate_table_description()
    • Parameters.add_parameter()
    • Parameters.create_parameter()
    • Parameters.add_default_metadata()
    • Parameters.update_spans()
    • Parameters.get_spans()
    • Parameters.get_pandas_dataframe()
    • Parameters.with_name_type()
    • Parameters.reading_data_header()
  • Parameter
    • Parameter.get_pandas_series()
    • Parameter.use_name()
    • Parameter.update_span()
• seabirdfilehandler.processing_steps module
  • CnvProcessingSteps
    • CnvProcessingSteps.get_names()
    • CnvProcessingSteps.extract_individual_modules()
    • CnvProcessingSteps.create_step_instance()
    • CnvProcessingSteps.get_step()
  • ProcessingStep
• seabirdfilehandler.utils module
  • get_unique_sensor_data()
  • UnexpectedFileFormat
• seabirdfilehandler.xmlfiles module
  • XMLFile
    • XMLFile.to_xml()
    • XMLFile.to_json()
  • XMLCONFile
    • XMLCONFile.get_sensor_info()
  • PsaFile

Module contents